BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G03SP1|AL427661
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1538 1838 0.0
>3x_Contig1538
Length = 9120
Score = 1838 bits (923), Expect = 0.0
Identities = 956/971 (98%), Gaps = 1/971 (0%)
Strand = Plus / Minus
Query: 1 atgntgaagaagagcaagctttttgtagagtttcagcaatggtcagcctggcttgctgaa 60
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3138 atgttgaagaagagcgagctttttgtagagtttcagcaatggtcagcctggcttgctgaa 3079
Query: 61 gcatcgaacgtaagtdntctttgctcttttcgggatcgactcctactgaagctgtcgctt 120
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3078 gcatcgaacgtaagtgttctttgctcttttcgggatcgactcctactgaagctgtcgctt 3019
Query: 121 ttgcagccgcacgtaatgtctgtaaaahaggtagtaaagtgtttgagagtaaagtcctct 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3018 ttgcagccgcacgtaatgtctgtaaaataggtagtaaagtgtttgagagtaaagtcctct 2959
Query: 181 gatagawagctcttttacgtctagacattttctcaacactatgtgatttcggtcttttgg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2958 gatagatagctcttttacgtctagacattttctcaacactatgtgatttcggtcttttgg 2899
Query: 241 caaccggtaaagcaaacggaggattgactggaaattgccaaggagggtggaatggaatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2898 caaccggtaaagcaaacggaggattgactggaaattgccaaggagggtggaatggaatct 2839
Query: 301 kctctctatgcaccacagttttgacagaaggatcgaagaaatatttttgttttctcttgg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2838 tctctctatgcaccacagttttgacagaaggatcgaagaaatatttttgttttctcttgg 2779
Query: 361 cttcttttcgtacaggcattttagtaactgtgcgcttcccagccttctccagagaacccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2778 cttcttttcgtacaggcattttagtaactgtgcgcttcccagccttctccagagaacccc 2719
Query: 421 tgawatcattcaaccggttggttgattcaggaaggtttggattaaataaagtcaactgtt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2718 tgatatcattcaaccggttggttgattcaggaaggtttggattaaataaagtcaactgtt 2659
Query: 481 tgagtttatagagcggtatactcttgatctgctgcttctcgcttagtttggtatcattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 tgagtttatagagcggtatactcttgatctgctgcttctcgcttagtttggtatcattca 2599
Query: 541 aagcatcgaaggaggctaactcttcgacagtcattgattccctttgcytcatttcttccg 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2598 aagcatcgaaggaggctaactcttcgacagtcattgattccctttgcttcatttcttccg 2539
Query: 601 cagagtaaaaactataaggcttcttcggacgacctgcactggtgaggcataagtctttcg 660
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 2538 cagagtaaaatctataaggcttcttcggacgacctgcactggtgaggcataagttttttg 2479
Query: 661 gatacggtggaccttttgaaactatttcttcgagcgccttcctttcttgttcacggttga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2478 gatacggtggaccttttgaaactatttcttcgagcgccttcctttcttgttcacggttga 2419
Query: 721 ttttttgttcttccttgagctgcttcctgtgattttttagtctatccttctccattttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 ttttttgttcttccttgagctgcttcctgtgattttttagtctatccttctccattttat 2359
Query: 781 gttcttcttttagcttctttttccgttcagtagtcagtctctttgcagtcttggcacatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 gttcttcttttagcttctttttccgttcagtagtcagtctctttgcagtcttggcacatt 2299
Query: 841 ctctggctattttactatatttccttcttaaacgttcctctgttgttgataaacccttat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 ctctggctattttactatatttccttcttaaacgttcctctgttgttgataaacccttat 2239
Query: 901 tgactagttcgtgtttgattttctgaggc-tgaaaacaacaattttagagccgacatttg 959
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2238 tgactagttcgtgtttgattttctgaggcttgaaaacaacaattttagagccgacatttg 2179
Query: 960 ttttwatagat 970
|||| |||||
Sbjct: 2178 ttttattagat 2168
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6731
Number of Sequences: 1807
Number of extensions: 6731
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)